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Epigenetic
Refers to mechanisms "in control" of (changing) gene expression (and interaction) primarily during development [e.g., of embryonic organism] which do not require changes in actual gene/DNA sequences, to occur.
Coined from the Greek epi= "upon" by Conrad H. Waddington in the 1940s, this term essentially means "above the genome", but more broadly refers to all of the non-classical genetic/heredity sources of a given organism's phenotype. For example:
- as a plant embryo develops into a seedling (juvenile
in the case of an animal), different genes are
expressed [or silenced] in that organism. Analogous
to mammal embryo development. For example, during
2002, researchers discovered that feeding small amounts
of folic acid to certain pregnant inbred (yellow-
colored) laboratory mice will cause their offspring to
have brown-colored fur via an epigenetic
change caused by DNA methylation because the folic
acid donates methyl molecular groups to the mouse's
chromatin; thereby silencing the applicable
gene (known as agouti gene). When epigenetic
change results from consumption of certain
foods/compounds, it is referred to as nutritional
epigenetics.
- as a result of certain disease(s) afflicting the
organism, different gene(s) within the organism's
DNA are silenced [or expressed]. For example,
hypoxia (e.g., resulting during tuberculosis or certain
cancers) has been shown to result in epigenetic events
within the bodies of relevant patients. When it
results from cancer, it is referred to as cancer
epigenetics.
- as an organism (especially during its embryo stage)
interacts with its environment, some of those
environmental impacts (e.g., temperature) cause
certain genes to be expressed (or silenced). For
example, the eggs of the saltwater crocodile
(Crocodylus porosus) yield a larger fraction
of male offspring when those eggs are incubated [in the
nest] at temperatures above 90oF
(32oC) than when those eggs are incubated
at temperatures below 90oF
(32oC).
- as an organism passes from juvenile stage to later
life stage(s). For example, the female honeybee
(Apis mellifera) "switches on"/off
approximately 40 percent of her total genes as she
matures from being a "nurse bee" (taking care of
pupae while she is a juvenile) to being a "forager
bee". During times in which the honeybee colony
is in need of more forager bees (i.e., adults), the
juveniles mature faster [to "forager bees"]
than during normal times.
Epigenetic events include impacts of micro-RNAs, gene silencing, DNA methylation, chromatin remodeling, chromatin modification, histone modification, paramutation, nucleolar dominance, and gene imprinting.
At least one type of epigenetic regulation is caused by changes in the (molecular-scale) shape of an organism's chromatin. Such "chromatin remodeling" can be caused by introduction (into cell) of certain short interfering RNA (siRNA), certain transcription activators, certain short chain fatty acids, etc.
Some epigenetic changes are heritable. For example, research indicates that a girl infant who experiences "famine" in the womb (i.e., her mother endures near-starvation while pregnant), is much more likely to have grandchildren who live shorter-than-average lifespans.
GENE, EXPRESSION, PHENOTYPE, DEOXYRIBONUCLEIC ACID (DNA), HEREDITY, GENE SILENCING, DIFFERENTIATION, DNA METHYLATION, ALKYLATING AGENTS, CHROMATIN, CHROMATIN REMODELING, HISTONES, SHORT INTERFERING RNA (siRNA), MICRO-RNAs, GENE IMPRINTING, IMPRINTING, ORGANISM, CENTRAL DOGMA (NEW), CANCER, CELL, HEDGEHOG SIGNALING PATHWAY, PARAMUTATION, NUCLEOLAR DOMINANCE, EPIGENETIC THERAPY, SHORT CHAIN FATTY ACIDS, GENOMIC IMPRINTING |